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software and analysis pipeline to pre-process raw data of the chromium single cell gene expression  (10X Genomics)

 
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    10X Genomics software and analysis pipeline to pre-process raw data of the chromium single cell gene expression
    Software And Analysis Pipeline To Pre Process Raw Data Of The Chromium Single Cell Gene Expression, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/software+and+analysis+pipeline+to+pre-process+raw+data+of+the+chromium+single+cell+gene+expression/chromium+single+cell+software+suite/pmc06831695-399-3-19
    Average 90 stars, based on 1 article reviews
    software and analysis pipeline to pre-process raw data of the chromium single cell gene expression - by Bioz Stars, 2026-10
    90/100 stars

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    Software:

    Article Title: Single-cell RNA-sequencing analysis of estrogen- and endocrine-disrupting chemical-induced reorganization of mouse mammary gland
    Article Snippet: .. The software and analysis pipeline to pre-process raw data of The Chromium Single Cell Gene Expression are available at https://support.10xgenomics.com/single-cell-gene-expression/software/overview/welcome . .. Most analyses and visualization were performed using Seurat package (V3.0.1; available at https://satijalab.org/seurat/install.html ) in support of GSVA (V1.30.0; https://bioconductor.org/packages/release/bioc/html/GSVA.html ), ape (V5.3; http://ape-package.ird.fr/ ), ggplot2 (V3.2.0; https://ggplot2.tidyverse.org/ ) and cowplot (V0.9.4; https://wilkelab.org/cowplot/ ) packages.

    Single Cell:

    Article Title: Single-cell RNA-sequencing analysis of estrogen- and endocrine-disrupting chemical-induced reorganization of mouse mammary gland
    Article Snippet: .. The software and analysis pipeline to pre-process raw data of The Chromium Single Cell Gene Expression are available at https://support.10xgenomics.com/single-cell-gene-expression/software/overview/welcome . .. Most analyses and visualization were performed using Seurat package (V3.0.1; available at https://satijalab.org/seurat/install.html ) in support of GSVA (V1.30.0; https://bioconductor.org/packages/release/bioc/html/GSVA.html ), ape (V5.3; http://ape-package.ird.fr/ ), ggplot2 (V3.2.0; https://ggplot2.tidyverse.org/ ) and cowplot (V0.9.4; https://wilkelab.org/cowplot/ ) packages.

    Gene Expression:

    Article Title: Single-cell RNA-sequencing analysis of estrogen- and endocrine-disrupting chemical-induced reorganization of mouse mammary gland
    Article Snippet: .. The software and analysis pipeline to pre-process raw data of The Chromium Single Cell Gene Expression are available at https://support.10xgenomics.com/single-cell-gene-expression/software/overview/welcome . .. Most analyses and visualization were performed using Seurat package (V3.0.1; available at https://satijalab.org/seurat/install.html ) in support of GSVA (V1.30.0; https://bioconductor.org/packages/release/bioc/html/GSVA.html ), ape (V5.3; http://ape-package.ird.fr/ ), ggplot2 (V3.2.0; https://ggplot2.tidyverse.org/ ) and cowplot (V0.9.4; https://wilkelab.org/cowplot/ ) packages.



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    10X Genomics software and analysis pipeline to pre-process raw data of the chromium single cell gene expression
    Software And Analysis Pipeline To Pre Process Raw Data Of The Chromium Single Cell Gene Expression, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/software+and+analysis+pipeline+to+pre-process+raw+data+of+the+chromium+single+cell+gene+expression/chromium+single+cell+software+suite/pmc06831695-399-3-19
    Average 90 stars, based on 1 article reviews
    software and analysis pipeline to pre-process raw data of the chromium single cell gene expression - by Bioz Stars, 2026-10
    90/100 stars
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